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Top Triggers of Autoimmune Flares

  • Writer: Dr Bret Ellington DACM, CFMP, LAc
    Dr Bret Ellington DACM, CFMP, LAc
  • Jan 5, 2021
  • 2 min read

Autoimmune Disorder sign and what triggers hypothyroid addisons lupus

Why Autoimmune Symptoms Fluctuate

Autoimmune diseases rarely remain constant. Many patients experience periods where symptoms worsen, followed by times where they feel relatively stable. These changes are not random.


Autoimmune flares are often driven by underlying triggers that increase inflammation and immune activity. Identifying and reducing these triggers is one of the most effective ways to improve symptom stability.


At Inner Balance Functional Medicine, we help patients recognize patterns behind their flares rather than viewing them as unpredictable.


What triggers autoimmune flares?

Common autoimmune flare triggers include stress, poor sleep, infections, food sensitivities, blood sugar instability, and environmental toxins.


Most Common Autoimmune Triggers

1. Chronic Stress

Stress affects the immune system directly. Elevated cortisol can dysregulate immune signaling and increase inflammation.

2. Poor Sleep

Sleep is when the body repairs and regulates immune activity. Poor sleep can worsen inflammation and immune reactivity.

3. Gut Dysfunction

Gut imbalance can increase immune activation and contribute to flare-ups.

4. Blood Sugar Swings

Unstable blood sugar increases inflammatory stress and hormone imbalance.

5. Infections

Viral or bacterial infections can trigger or worsen autoimmune symptoms.

6. Food Sensitivities

Certain foods may trigger immune responses in sensitive individuals.

7. Environmental Toxins

Chemical exposure can increase immune stress and inflammation.

If your symptoms flare in cycles, it is often because one or more of these triggers is present.


Why Identifying Triggers Matters


When triggers are not addressed:

  • Inflammation remains elevated

  • Symptoms become unpredictable

  • Recovery slows

  • The immune system stays reactive


When triggers are identified:

  • Flares become less frequent

  • Symptoms stabilize

  • The body becomes more resilient


Functional Medicine Approach

We look for patterns rather than isolated symptoms.

This may include:

  • Reviewing symptom timing

  • Identifying lifestyle triggers

  • Assessing stress and sleep patterns

  • Evaluating gut health

  • Supporting immune balance


Check out some of our other related blogs


Reduce your autoimmune triggers and create more stable health patterns. Let’s have a conversation about your longterm health goals. Book your complementary functional medicine consultation and let’s identify exactly what your body needs!

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